Arnaud Lefebvre


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Repeats detection

FORRepeats: a linear time and space method for repeats detection on entire genomes and between genomes.

Advantages:
* Very fast and space economical (1 second and 10Mb for a 1Mb sequence);
* Very easy to implement.

Availability:
FORRepeats is not yet available. If you are interested in using FORRepeats, please let me know: a mailing list is under construction.
Applets

Suffix permutation and (Lyndon) words

Border Array on Bounded Alphabet
Data compression

Compror 2.1: an experimental data compression method, developed under and for linux.

Xorc 1.0: graphical version of Compror.
Developed with Tk/Perl, easy to install (follow the instructions of the README file), it allows you to use Compror, renamed orc (oracle compression). It creates .orc files and uncompresses your .orc files.

Please let me know if you have comments or find bugs.
Utilities

psexplode: Perl script splitting a postscript file.
Posters, algorithms and timetables with LaTeX

Create your A0 posters using the ABISS_poster class, write algorithms using the ALgo style or write your timetables with the edt class for LaTeX.
Go to the download page.
 Arnaud Lefebvre